ykvZ [2018-10-11 18:20:56]

similar to transcriptional regulator ([SW|LacI family])

locus: BSU13870

pI: 7.30

mw: 36.04 kDa

protein length: 321 aa

gene length: 963 bp

function: unknown

product: transcriptional regulator ([SW|LacI family])

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

Gene

Coordinates: 1,455,064 → 1,456,029

The protein

Protein family

• [SW|LacI family]

Structure

• [PDB|2HSG] ([protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA], 30% identity)

Expression and Regulation

Operons

• genes: [gene|C95EEAC79B9E823BBBCF6B1960DABCCBB2AC03A4|papB]-[gene|6FDE01EEFCDB2F949A902DFD76A341410B867E88|ykvZ]-[gene|BC0DF593AE969F1DBC5E9E2BACF1C00BE4FEE449|glcT]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B331 (ykvZ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1330 NBRP B. subtilis, Japan]
• BKE13870 (Δ[gene|6FDE01EEFCDB2F949A902DFD76A341410B867E88|ykvZ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13870 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGATTCCCTTCTTTCTA, downstream forward: _UP4_TAGTGAATGCATTGAAAAAA
• BKK13870 (Δ[gene|6FDE01EEFCDB2F949A902DFD76A341410B867E88|ykvZ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13870 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGATTCCCTTCTTTCTA, downstream forward: _UP4_TAGTGAATGCATTGAAAAAA